We identified and fixed a technical data-processing error in CornCyc 3.5.
Our updated CornCyc 4.0 contains:
The corrected and updated database, CornCyc 4.0, plus seventeen other databases are available online and can be downloaded as well.
We continue to roll out our PMN 8 release that started in June:
New additions:
Released in June 2013:
Seven new databases:
Seven updated databases:
Plus explore new software features for data display and analysis at the PMN website.
Seven new databases:
Ten updated databases:
Plus explore new software features for data display and analysis at the PMN website.
The PMN invites you to come to our workshop at the Plant and Animals Genome Conference (PAG XXI) on Sunday, January 13 in San Diego.
The PMN, the Sol Genomics Network (SolCyc), and PMN users will present an overview of our databases and examples of their applications to ongoing research.
Early registration ends on November 1.
We hope to see you there!
Or you can download the presentation to view on your computer.
Now you're doubly likely to find Arabidopsis genes using
AND
because the PMN has loaded the latest set of gene "symbols" from TAIR into AraCyc.
Now over 4600 symbols are linked to over 3100 genes!
We hope this will make it easier than ever to find your favorite metabolic genes in AraCyc!
Get the data you want in the format you need using the Groups functions at the PMN.
* Got a list of up-regulated genes?
* Want to know all of the compounds present in the pathways they act in?
* Need to get their structures in SMILES or InChi format?
Then get going with PMN Groups!
Simply register for free and then watch for opportunities to turn your search results into data-rich Groups.
Did you know that you can download all eleven of the PMN databases plus the Pathway Tools software?
Working on a local copy of a database enables you to:
You can try it out today!
Once again, the Plant Metabolic Network is growing and this time it's expanding beyond flowering plants with four new databases:
Come see how our new databases can help you explore metabolism in a broader comparative context.
Then meet with a PMN curator one-on-one at the Outreach Booth (215) during the ASPB Plant Biology 2012 conference.
Additional PMN learning opportunities:
Saturday - 7:30 PM - [Presentation]
Sunday - 6:30 PM - [Poster]
Check out this special Science issue on Plant Metabolism
Peruse more than 10 reviews, reports, perspectives, and even a podcast to learn about some of the most recent high impact research on medicinal compounds, carbon and nitrogen metabolism, hormonal modifications, metabolic pathway diversification and evolution, and much more . . .
