New viewer for a global metabolic map

Jun

01

2010

By Administrator

Do you want to highlight a compound or reaction on a global metabolic map for a single species?
Would you like to overlay your transcript expression, proteomic, or metabolomic data onto a zoomable set of pathways?

Please come check out the new metabolic (cellular) overview using AraCyc or PoplarCyc.

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Recent News

Nov

19

2024

PMN 16 in Focus: New Publication Available Now

By Gaëlle Cassin-Ross

We are thrilled to to announce the publication of an article featuring the latest release of the Plant Metabolic Network (PMN 16) in Nucleic Acids Research! This comprehensive update includes over 1,200 metabolic pathways, 1.3 million enzymes, 8,000 metabolites, and data for 155 plant and green algal genomes, with 29 new species added. PMN 16 also introduces 52 experimentally validated enzymes and an enhanced PlantCyc reference database. The article details how PMN 16 supports metabolic studies, omics data analysis, and educational efforts in plant science.

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Publication

Nov

19

2024

The PMN Pipeline has been released

By Charles Hawkins

PMN has been serving the plant science community for more than fifteen years, but until now the resource has been limited to the species databses created by the PMN team using our in-house database createion pipeline. Now, however, for the first time, we have released our database pipeline to the public so that you can create your own metabolism database like those found in PMN!

Aug

01

2024

PMN 16 Released!

By Charles Hawkins

We are super excited to announce the release of PMN 16! PMN 16 introduces twenty-eight new single-species databases, and new versions of the existing 127 databases, for a total of 155. Selection of new species was focused on understudied plants and plant groups. The first data from our collaboration with the labs of Hiroshi Maeda (UW-Madison) and Philipp Zerbe (UC Davis) are also incorporated into this release, with more to come!

News archives

New viewer for a global metabolic map

PMN 16 in Focus: New Publication Available Now

The PMN Pipeline has been released

PMN 16 Released!

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