TomatoCyc 1.0

Parent

Overview

Released:

Taxonomic Range:

Solanum lycopersicum

Protein Sequence Source:

Phytozome v10: Slycopersicum_225_protein.fa

Enzyme Functional Annotation Method:

Enzyme Evidence:

Almost exclusively large-scale computational predictions of enzyme function not subject to curator review
Small number of manually curated enzymes

Pathway Prediction Program:

Pathway Tools v18.5

SAVI pathway validation lists:

Pathway Evidence:

Primarily computational prediction of pathways followed by SAVI refinement and curator review
Additional pathways imported from MetaCyc based on experimental evidence or curator inference

Content Statistics

Pathways:

589

Enzymes:

7106

Reactions:

3379

Compounds:

2557

Citations:

3634