McommodaCyc 1.5

Parent

Overview

Released:

Taxonomic Range:

Micromonas commoda RCC299

Protein Sequence Source:

Phytozome v12: MspRCC299_229_v3.0.protein.fa

Enzyme Functional Annotation Method:

Enzyme Evidence:

Almost exclusively large-scale computational predictions of enzyme function not subject to curator review
Small number of manually curated enzymes

Pathway Prediction Program:

Pathway Tools v20.5 (primarily)

SAVI pathway validation lists:

Pathway Evidence:

Substantial manual curation of pathways
Some computational prediction of pathways followed by curator review
Additional pathways imported from MetaCyc based on curator inference

Content Statistics

Pathways:

308

Enzymes:

1812

Reactions:

1976

Compounds:

1447

Citations:

2763