BrachypodiumCyc 5.5

Parent

Overview

Released:

Taxonomic Range:

Brachypodium distachyon

Protein Sequence Source:

Phytozome v12: Bdistachyon_314_v3.1.protein.fa

Enzyme Functional Annotation Method:

Enzyme Evidence:

Almost exclusively large-scale computational predictions of enzyme function not subject to curator review
Small number of manually curated enzymes

Pathway Prediction Program:

Pathway Tools v20.5

SAVI pathway validation lists:

Pathway Evidence:

Primarily computational prediction of pathways followed by SAVI refinement and curator review
Additional pathways imported from MetaCyc based on experimental evidence or curator inference

Link to PGDB:

BrachypodiumCyc

Content Statistics

Pathways:

495

Enzymes:

5338

Reactions:

3033

Compounds:

2320

Citations:

3839