A number of pathways have been deleted * from the database since the previous release. In some cases, they have been replaced by an alternative form of the pathway.
Pathways deleted in AraCyc 7.0
- 2-O-alpha-mannosyl-D-glycerate degradation [ MetaCyc: PWY0-1300]
- Entner-Doudoroff pathway I [ MetaCyc: ENTNER-DOUDOROFF-PWY]
- This pathway does not appear to exist in plants.
- trans-lycopene biosynthesis I (bacteria) [ MetaCyc:PWY-5942]
- Replaced by plant variant trans-lycopene biosynthesis II (plants)
- superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle [PWY-5464] [ MetaCyc]
* Please note that we have a separate list of pathways where the database ID for the pathway has changed, but the series of reactions, compounds, etc., present in the pathway remain the same.
You can also see a list of all the pathways that have been removed from AraCyc after the AraCyc 1.0 release.
Return to the AraCyc Release Notes page
Return to the PMN Release Notes page
