Several pathways have been updated based on new data concerning the pathway structure, intermediate compounds, or other types of information *. We have also recorded pathways with new Database IDs that do not have substantially revised content.
Pathway updates in AraCyc 6.0
- IAA biosynthesis I
- IAA conjugate biosynthesis II (made into superpathway)
- jasmonic acid biosynthesis
- proanthocyanidin biosynthesis from flavanols
Pathway ID changes in AraCyc 6.0
- asparagine degradation I
[old ID (PWY-4001) replaced by new ID (ASPARAGINE-DEG1-PWY)] - GDP-mannose biosynthesis II
[old ID (PWYQT-4434) replaced by new ID (PWY-5659)]
* Please note that in general, a pathway is not considered to be "updated" if the reactions and structure of the pathway remain the same, but, new enzymes have been assigned to the pathway, especially if the assignments are based on computational predictions.
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