ParentOverviewReleased: PMN 16 (July 2024) Taxonomic Range: Populus trichocarpaProtein Sequence Source: Phytozome v13:Ptrichocarpa_533_v4.1.protein.fa Enzyme Functional Annotation Method: E2P2v5.0 Enzyme Evidence: Almost exclusively large-scale computational predictions of enzyme function not subject to curator review Small number of manually curated enzymes Pathway Prediction Program: Pathway Tools 28.0SAVI pathway validation lists: MCP 2.0AIPP 7.0CAPP 7.0CVP 7.0NPP 10.0UPP 10.0 Pathway Evidence: Primarily computational prediction of pathways followed by SAVI refinement and curator review Additional pathways imported from MetaCyc based on experimental evidence or curator inference Link to PGDB: PoplarCyc Content StatisticsNumber of Pathways: 524Number of Reactions: 3367Number of Compounds: 2703Number of Enzymes: 12053Number of Citations: 4697
