AraCyc 18.0.0

Parent

Overview

Released:

PMN 16 (July 2024)

Taxonomic Range:

Arabidopsis thaliana col

Protein Sequence Source:

AraPort v11: Araport11_genes.201606.pep.repr.fasta

Enzyme Functional Annotation Method:

Enzyme Evidence:

Substantial manual curation of enzymes
In addition, large-scale computational predictions of enzyme function not subject to curator review

Pathway Prediction Program:

Pathway Tools 28.0

SAVI pathway validation lists:

MCP 2.0
AIPP 7.0
CAPP 7.0
CVP 7.0
NPP 10.0
UPP 10.0

Pathway Evidence:

Substantial manual curation of pathways
Some computational prediction of pathways followed by curator review
Additional pathways imported from MetaCyc based on curator inference

Link to PGDB:

Content Statistics

Number of Pathways:

618

Number of Reactions:

3837

Number of Compounds:

3080

Number of Enzymes:

10038

Number of Citations:

7656