AraCyc 17.0

Parent

Overview

Released:

PMN 14.0 (January 2020)

Taxonomic Range:

Arabidopsis thaliana col

Protein Sequence Source:

AraPort v11: Araport11_genes.201606.pep.repr.fasta

Enzyme Functional Annotation Method:

Enzyme Evidence:

Substantial manual curation of enzymes
In addition, large-scale computational predictions of enzyme function not subject to curator review

Pathway Prediction Program:

Pathway Tools 23.0

SAVI pathway validation lists:

MCP 2.0
AIPP 6.0
CAPP 6.0
CVP 6.0
NPP 9.0
UPP 9.0

Pathway Evidence:

Substantial manual curation of pathways
Some computational prediction of pathways followed by curator review
Additional pathways imported from MetaCyc based on curator inference

Link to PGDB:

Content Statistics

Number of Pathways:

650

Number of Reactions:

3793

Number of Compounds:

3030

Number of Enzymes:

8556

Number of Citations:

7221