ParentOverviewReleased: April 2018Taxonomic Range: Theobroma cacaoProtein Sequence Source: Phytozome v12: Tcacao_233_v1.1.protein.fahttp://genome.jgi.doe.gov/pages/dynamicOrganismDownload.jsf?organism=Phytozome Enzyme Functional Annotation Method: E2P2 v3.1 Enzyme Evidence: Almost exclusively large-scale computational predictions of enzyme function not subject to curator review Small number of manually curated enzymes Pathway Prediction Program: Pathway Tools v20.5 (primarily)SAVI pathway validation lists: CAPP 4.0AIPP 4.0MCP 2.0NPP 7.0UPP 7.0Pathway Evidence: Substantial manual curation of pathways Some computational prediction of pathways followed by curator review Additional pathways imported from MetaCyc based on curator inference Link to PGDB: CocoaCyc Content StatisticsPathways: 509Enzymes: 5181Reactions: 3192Compounds: 2442Citations: 3982
