List of Pathway/Genome Databases
| DATABASE | VERSION | SPECIES | PATHWAYS | ENZYMES | REACTIONS | COMPOUNDS | CITATIONS |
|---|---|---|---|---|---|---|---|
| PlantCyc | 16.0.0 | primarily Viridiplantae | 1,162 | 4,549 | 5,477 | 4,906 | 11,885 |
| AraCyc | 18.0.0 | Arabidopsis thaliana col | 618 | 10,038 | 3,837 | 3,080 | 7,656 |
| ChlamyCyc | 11.0.0 | Chlamydomonas reinhardtii | 375 | 6,633 | 2,854 | 2,081 | 4,270 |
| CornCyc | 12.0.0 | Zea mays mays | 512 | 16,347 | 3,475 | 2,769 | 5,238 |
| SoyCyc | 11.0.0 | Glycine max | 546 | 19,410 | 3,543 | 2,803 | 5,381 |
| OryzaCyc | 8.0.0 | Oryza sativa Japonica Group | 524 | 8,338 | 3,439 | 2,736 | 5,305 |
| Aagrestis_BonnCyc | 1.0.0 | Anthoceros agrestis | 309 | 1,809 | 1,802 | 1,579 | 2,652 |
| Aagrestis_oxfordCyc | 1.0.0 | Anthoceros agrestis | 289 | 1,725 | 1,673 | 1,459 | 2,425 |
| AangustusCyc | 1.0.0 | Anthoceros angustus | 284 | 640 | 1,587 | 1,385 | 2,431 |
| AcoeruleaCyc | 3.0.0 | Aquilegia coerulea | 525 | 9,730 | 3,351 | 2,687 | 4,489 |
| AfilliculoidesCyc | 1.0.0 | Azolla filiculoides | 303 | 941 | 1,731 | 1,484 | 2,673 |
| AhalleriCyc | 5.0.0 | Arabidopsis halleri | 503 | 9,302 | 3,265 | 2,603 | 4,274 |
| AhypochondriacusCyc | 4.0.0 | Amaranthus hypochondriacus | 502 | 5,422 | 3,144 | 2,560 | 4,463 |
| AlyrataCyc | 4.0.0 | Arabidopsis lyrata | 506 | 6,990 | 3,306 | 2,636 | 4,311 |
| AlyssumCyc | 1.0.0 | Lobularia maritima | 333 | 1,211 | 1,938 | 1,687 | 2,738 |
| AmborellaCyc | 4.0.0 | Amborella trichopoda | 500 | 5,242 | 3,265 | 2,662 | 4,393 |
| AppleRingAcaciaCyc | 1.0.0 | Faidherbia albida | 367 | 1,410 | 2,071 | 1,771 | 3,125 |
| ApunctatusCyc | 1.0.0 | Anthoceros punctatus | 305 | 1,451 | 1,755 | 1,502 | 2,528 |
| AsparagusCyc | 3.0.0 | Asparagus officinalis | 494 | 5,732 | 3,230 | 2,651 | 4,324 |
| BambaraBeanCyc | 1.0.0 | Vigna subterranea | 361 | 1,400 | 2,074 | 1,771 | 3,083 |
| BananaCyc | 4.0.0 | Musa acuminata | 500 | 9,872 | 3,159 | 2,539 | 4,325 |
| BarleyCyc | 9.0.0 | Hordeum vulgare | 493 | 7,893 | 3,092 | 2,519 | 4,373 |
| BlackPepperCyc | 1.0.0 | Piper nigrum | 370 | 2,380 | 2,089 | 1,829 | 3,108 |
| Boleracea_capitataCyc | 4.0.0 | Brassica oleracea capitata | 480 | 7,628 | 3,114 | 2,495 | 4,040 |
| Boleracea_oleraceaCyc | 4.0.0 | Brassica oleracea | 504 | 12,347 | 3,319 | 2,645 | 4,247 |
| BrachypodiumCyc | 9.0.0 | Brachypodium distachyon | 500 | 12,097 | 3,246 | 2,638 | 4,341 |
| Brapa_fpscCyc | 4.0.0 | Brassica rapa | 505 | 9,667 | 3,279 | 2,602 | 4,270 |
| BreadfruitCyc | 1.0.0 | Artocarpus altilis | 353 | 1,540 | 2,059 | 1,782 | 3,095 |
| BreadwheatCyc | 4.0.0 | Triticum aestivum | 576 | 30,897 | 3,888 | 3,158 | 5,116 |
| BstrictaCyc | 4.0.0 | Boechera stricta | 492 | 6,734 | 3,190 | 2,531 | 4,120 |
| CacuminataCyc | 4.0.0 | Camptotheca acuminata | 506 | 6,602 | 3,244 | 2,621 | 4,362 |
| CamelinaCyc | 1.0.0 | Camelina sativa | 415 | 4,221 | 2,715 | 2,263 | 3,697 |
| CannuumCyc | 3.0.0 | Capsicum annuum | 568 | 8,134 | 3,730 | 3,100 | 5,081 |
| Carietinum_icc4958Cyc | 4.0.0 | Cicer arietinum | 513 | 6,518 | 3,469 | 2,752 | 4,527 |
| CarnationCyc | 3.0.0 | Dianthus caryophyllus | 510 | 7,737 | 3,286 | 2,702 | 4,428 |
| CarrotCyc | 4.0.0 | Daucus carota | 497 | 7,166 | 3,233 | 2,617 | 4,412 |
| CashewCyc | 3.0.0 | Anacardium occidentale | 518 | 19,150 | 3,414 | 2,757 | 4,571 |
| CassavaCyc | 11.0.0 | Manihot esculenta | 519 | 13,522 | 3,364 | 2,718 | 4,528 |
| CastorbeanCyc | 4.0.0 | Ricinus communis | 532 | 6,978 | 4,034 | 3,254 | 4,998 |
| CcampestrisCyc | 2.0.0 | Cuscuta campestris | 515 | 9,559 | 3,426 | 2,789 | 4,523 |
| CcapsularisCyc | 3.0.0 | Corchorus capsularis | 503 | 5,256 | 3,179 | 2,528 | 4,381 |
| CgrandifloraCyc | 4.0.0 | Capsella grandiflora | 491 | 6,027 | 3,169 | 2,496 | 4,135 |
| CgiganteaCyc | 3.0.0 | Calotropis gigantea | 490 | 4,629 | 3,205 | 2,601 | 4,236 |
| ChinesecabbageCyc | 9.0.0 | Brassica rapa pekinensis | 508 | 20,905 | 3,354 | 2,666 | 4,335 |
| ClementineCyc | 4.0.0 | Citrus x clementina | 510 | 8,480 | 3,308 | 2,672 | 4,426 |
| CoastRedwoodCyc | 1.0.0 | Sequoia sempervirens | 432 | 6,617 | 2,795 | 2,366 | 3,789 |
| CocoaCyc | 4.0.0 | Theobroma cacao | 515 | 8,863 | 3,320 | 2,686 | 4,470 |
| CommonbeanCyc | 4.0.0 | Phaseolus vulgaris | 515 | 8,794 | 3,280 | 2,610 | 4,432 |
| CorkoakCyc | 2.0.0 | Quercus suber | 542 | 15,232 | 4,191 | 3,438 | 5,112 |
| CroseusCyc | 4.0.0 | Catharanthus roseus | 515 | 5,411 | 3,318 | 2,702 | 4,499 |
| CrubellaCyc | 4.0.0 | Capsella rubella | 498 | 6,486 | 3,227 | 2,552 | 4,193 |
| Csativa_pkCyc | 4.0.0 | Cannabis sativa | 511 | 5,790 | 3,347 | 2,682 | 4,406 |
| CsubellipsoideaCyc | 4.0.0 | Coccomyxa subellipsoidea C-169 | 339 | 2,373 | 2,489 | 1,971 | 3,357 |
| CucumberCyc | 4.0.0 | Cucumis sativus | 495 | 7,228 | 3,142 | 2,534 | 4,344 |
| CvariabilisCyc | 2.0.0 | Chlorella variabilis | 356 | 17,711 | 2,662 | 2,090 | 3,496 |
| CzofingiensisCyc | 3.0.0 | Chromochloris zofingiensis | 358 | 3,198 | 2,773 | 2,204 | 3,416 |
| DatepalmCyc | 2.0.0 | Phoenix dactylifera | 528 | 5,908 | 3,380 | 2,710 | 4,526 |
| DrabaCyc | 1.0.0 | Draba nivalis | 333 | 1,409 | 1,901 | 1,691 | 2,833 |
| DrotundataCyc | 4.0.0 | Dioscorea cayenensis rotundata | 524 | 13,260 | 3,443 | 2,808 | 4,569 |
| EggplantCyc | 3.0.0 | Solanum melongena | 518 | 6,997 | 3,358 | 2,685 | 4,581 |
| EgrandisCyc | 4.0.0 | Eucalyptus grandis | 520 | 12,168 | 3,406 | 2,782 | 4,477 |
| EsalsugineumCyc | 4.0.0 | Eutrema salsugineum | 485 | 6,730 | 3,193 | 2,527 | 4,047 |
| EuropeanpearCyc | 3.0.0 | Pyrus communis | 503 | 8,468 | 3,257 | 2,625 | 4,372 |
| FlaxCyc | 4.0.0 | Linum usitatissimum | 536 | 10,564 | 3,435 | 2,778 | 4,654 |
| Fvesca_vescaCyc | 5.0.0 | Fragaria vesca | 517 | 14,504 | 3,368 | 2,726 | 4,525 |
| GamNuiCyc | 1.0.0 | Gnetum montanum | 331 | 1,582 | 1,900 | 1,693 | 2,784 |
| GarlicCyc | 1.0.0 | Allium sativum | 388 | 2,833 | 2,341 | 2,028 | 3,338 |
| GinkgoCyc | 2.0.0 | Ginkgo biloba | 468 | 7,282 | 3,160 | 2,554 | 4,108 |
| GraimondiiCyc | 4.0.0 | Gossypium raimondii | 506 | 18,360 | 3,398 | 2,765 | 4,482 |
| GrapeCyc | 11.0.0 | Vitis vinifera | 535 | 9,360 | 3,471 | 2,834 | 4,753 |
| HaasAvocadoCyc | 1.0.0 | Persea americana americana | 318 | 1,155 | 1,839 | 1,581 | 2,680 |
| HopCyc | 3.0.0 | Humulus lupulus | 526 | 12,061 | 3,517 | 2,838 | 4,585 |
| HuskTomatoCyc | 1.0.0 | Physalis pubescens | 334 | 1,362 | 1,916 | 1,670 | 2,892 |
| JackfruitCyc | 1.0.0 | Artocarpus heterophyllus | 371 | 1,667 | 2,182 | 1,906 | 3,173 |
| KfedtschenkoiCyc | 3.0.0 | Kalanchoe fedtschenkoi | 504 | 10,403 | 3,312 | 2,689 | 4,413 |
| KlaxifloraCyc | 4.0.0 | Kalanchoe laxiflora | 508 | 16,221 | 3,294 | 2,670 | 4,470 |
| LerCyc | 2.0.0 | Arabidopsis thaliana ler | 309 | 7,033 | 2,875 | 2,383 | 3,135 |
| LettuceCyc | 2.0.0 | Lactuca sativa | 519 | 14,776 | 3,429 | 2,790 | 4,541 |
| LjaponicusCyc | 5.0.0 | Lotus japonicus | 513 | 6,690 | 3,195 | 2,593 | 4,345 |
| LperrieriCyc | 4.0.0 | Leersia perrieri | 507 | 8,095 | 3,248 | 2,660 | 4,324 |
| MbalbisianaCyc | 2.0.0 | Musa balbisiana | 492 | 6,932 | 3,074 | 2,470 | 4,268 |
| McommodaCyc | 4.0.0 | Micromonas commoda | 325 | 2,176 | 2,300 | 1,865 | 3,118 |
| MdomesticaCyc | 4.0.0 | Malus domestica | 524 | 10,667 | 3,485 | 2,814 | 4,591 |
| MexicanAvocadoCyc | 1.0.0 | Persea americana drymifolia | 328 | 1,115 | 1,898 | 1,662 | 2,745 |
| MguttatusCyc | 4.0.0 | Erythranthe guttata | 496 | 7,676 | 3,247 | 2,665 | 4,363 |
| MoringaCyc | 1.0.0 | Moringa oleifera | 312 | 887 | 1,805 | 1,600 | 2,576 |
| MosobambooCyc | 2.0.0 | Phyllostachys edulis | 520 | 12,479 | 3,338 | 2,724 | 4,521 |
| MossCyc | 9.0.0 | Physcomitrium patens | 430 | 18,964 | 3,127 | 2,483 | 3,903 |
| MpolymorphaCyc | 3.0.0 | Marchantia polymorpha | 432 | 5,159 | 2,926 | 2,327 | 3,759 |
| MpusillaCyc | 4.0.0 | Micromonas pusilla | 323 | 2,110 | 2,283 | 1,869 | 3,133 |
| MsinensisCyc | 3.0.0 | Miscanthus sinensis | 520 | 17,581 | 3,507 | 2,813 | 4,614 |
| MtruncatulaCyc | 5.0.0 | Medicago truncatula | 534 | 9,212 | 3,412 | 2,773 | 4,643 |
| MuskmelonCyc | 2.0.0 | Cucumis melo | 493 | 5,509 | 3,139 | 2,530 | 4,329 |
| Ntabacum_tn90Cyc | 4.0.0 | Nicotiana tabacum | 605 | 14,074 | 4,008 | 3,247 | 5,384 |
| ObarthiiCyc | 2.0.0 | Oryza barthii | 506 | 7,943 | 3,306 | 2,686 | 4,456 |
| ObrachyanthaCyc | 4.0.0 | Oryza brachyantha | 506 | 6,138 | 3,217 | 2,607 | 4,427 |
| Oeuropaea_sylvestrisCyc | 3.0.0 | Olea europaea | 507 | 8,601 | 3,320 | 2,687 | 4,472 |
| OglaberrimaCyc | 4.0.0 | Oryza glaberrima | 494 | 6,448 | 3,162 | 2,537 | 4,263 |
| OilpalmCyc | 3.0.0 | Elaeis guineensis | 467 | 6,222 | 3,041 | 2,440 | 4,127 |
| OilseedrapeCyc | 4.0.0 | Brassica napus | 522 | 20,946 | 3,487 | 2,801 | 4,517 |
| OlongistaminataCyc | 2.0.0 | Oryza longistaminata | 511 | 6,950 | 3,274 | 2,697 | 4,441 |
| OlucimarinusCyc | 4.0.0 | Ostreococcus sp. lucimarinus | 312 | 1,797 | 2,119 | 1,743 | 3,017 |
| OmeridionalisCyc | 2.0.0 | Oryza meridionalis | 482 | 8,563 | 3,119 | 2,595 | 4,305 |
| OnivaraCyc | 2.0.0 | Oryza nivara | 508 | 8,988 | 3,248 | 2,637 | 4,384 |
| OpunctataCyc | 4.0.0 | Oryza punctata | 498 | 8,322 | 3,197 | 2,578 | 4,318 |
| OrufipogonCyc | 4.0.0 | Oryza rufipogon | 504 | 8,787 | 3,279 | 2,653 | 4,447 |
| OthomaeumCyc | 4.0.0 | Oropetium thomaeum | 489 | 5,409 | 3,052 | 2,443 | 4,256 |
| PapayaCyc | 9.0.0 | Carica papaya | 493 | 5,052 | 3,248 | 2,605 | 4,197 |
| PaxillarisCyc | 3.0.0 | Petunia axillaris | 570 | 8,015 | 3,788 | 3,024 | 4,898 |
| PhalliiCyc | 4.0.0 | Panicum hallii | 512 | 8,553 | 3,272 | 2,643 | 4,373 |
| PigeonpeaCyc | 2.0.0 | Cajanus cajan | 518 | 7,445 | 3,393 | 2,694 | 4,476 |
| PineappleCyc | 4.0.0 | Ananas comosus | 481 | 5,511 | 3,082 | 2,484 | 4,218 |
| PocketWaterLilyCyc | 1.0.0 | Nymphaea colorata | 320 | 2,195 | 1,858 | 1,581 | 2,778 |
| PoplarCyc | 14.0.0 | Populus trichocarpa | 524 | 12,053 | 3,367 | 2,703 | 4,697 |
| PotatoCyc | 8.0.0 | Solanum tuberosum | 561 | 11,678 | 3,591 | 2,906 | 5,060 |
| PpersicaCyc | 4.0.0 | Prunus persica | 514 | 11,142 | 3,299 | 2,657 | 4,424 |
| QuinoaCyc | 3.0.0 | Chenopodium quinoa | 524 | 10,520 | 3,335 | 2,683 | 4,496 |
| RchinensisCyc | 4.0.0 | Rosa chinensis | 523 | 9,617 | 3,442 | 2,811 | 4,533 |
| RedcloverCyc | 4.0.0 | Trifolium pratense | 575 | 9,072 | 3,796 | 3,040 | 4,923 |
| RedsageCyc | 4.0.0 | Salvia miltiorrhiza | 516 | 7,233 | 3,371 | 2,731 | 4,462 |
| RmultifloraCyc | 3.0.0 | Rosa multiflora | 530 | 13,808 | 3,496 | 2,861 | 4,655 |
| RosemaryCyc | 1.0.0 | Salvia rosmarinus | 392 | 2,441 | 2,295 | 1,936 | 3,337 |
| RubbertreeCyc | 2.0.0 | Hevea brasiliensis | 575 | 9,880 | 3,886 | 3,187 | 5,072 |
| RyeCyc | 1.0.0 | Secale cereale | 377 | 2,070 | 2,175 | 1,923 | 3,231 |
| SacredlotusCyc | 2.0.0 | Nelumbo nucifera | 498 | 8,674 | 3,210 | 2,588 | 4,296 |
| SelaginellaCyc | 9.0.0 | Selaginella moellendorffii | 445 | 5,466 | 3,103 | 2,495 | 3,941 |
| SetariaCyc | 8.0.0 | Setaria italica | 514 | 9,162 | 3,293 | 2,676 | 4,404 |
| SfallaxCyc | 4.0.0 | Sphagnum fallax | 422 | 10,646 | 2,979 | 2,398 | 3,815 |
| SoleraceaCyc | 4.0.0 | Spinacia oleracea | 528 | 5,188 | 3,451 | 2,782 | 4,733 |
| SorghumbicolorCyc | 8.0.0 | Sorghum bicolor | 511 | 9,869 | 3,319 | 2,695 | 4,516 |
| SpennelliiCyc | 3.0.0 | Solanum pennellii | 559 | 7,953 | 3,714 | 2,986 | 4,830 |
| SpiderflowerCyc | 2.0.0 | Tarenaya hassleriana | 499 | 9,087 | 3,251 | 2,604 | 4,216 |
| SpirodelaCyc | 6.0.0 | Spirodela polyrhiza | 469 | 4,179 | 2,883 | 2,304 | 3,976 |
| StoraCyc | 2.0.0 | Senna tora | 345 | 1,356 | 1,961 | 1,696 | 2,982 |
| StrawberryCyc | 1.0.0 | Fragaria x ananassa | 357 | 5,344 | 2,166 | 1,909 | 3,218 |
| SugarbeetCyc | 4.0.0 | Beta vulgaris vulgaris | 527 | 5,707 | 3,529 | 2,849 | 4,726 |
| SunflowerCyc | 3.0.0 | Helianthus annuus | 524 | 11,463 | 3,440 | 2,779 | 4,623 |
| SviridisCyc | 4.0.0 | Setaria viridis | 518 | 10,579 | 3,318 | 2,705 | 4,471 |
| SweetcherryCyc | 2.0.0 | Prunus avium | 521 | 6,897 | 3,326 | 2,695 | 4,471 |
| SweetorangeCyc | 4.0.0 | Citrus sinensis | 514 | 11,835 | 3,378 | 2,734 | 4,491 |
| SweetWormwoodCyc | 1.0.0 | Artemisia annua | 420 | 2,967 | 2,566 | 2,176 | 3,541 |
| SwitchgrassCyc | 8.0.0 | Panicum virgatum | 530 | 25,856 | 3,492 | 2,866 | 4,660 |
| TeaCyc | 3.0.0 | Camellia sinensis sinensis | 513 | 10,655 | 3,285 | 2,669 | 4,437 |
| TeffCyc | 1.0.0 | Eragrostis tef | 421 | 2,903 | 2,613 | 2,239 | 3,759 |
| TidestromiaCyc | 3.0.0 | Tidestromia suffruticosa oblongifolia | 486 | 8,497 | 3,106 | 2,503 | 4,235 |
| TomatoCyc | 7.0.0 | Solanum lycopersicum | 562 | 7,671 | 3,546 | 2,870 | 4,880 |
| TparvulaCyc | 4.0.0 | Schrenkiella parvula | 522 | 5,839 | 3,546 | 2,841 | 4,459 |
| VcarteriCyc | 4.0.0 | Volvox carteri | 358 | 3,117 | 2,732 | 2,115 | 3,442 |
| WatermelonCyc | 2.0.0 | Citrullus lanatus | 486 | 4,786 | 3,108 | 2,546 | 4,283 |
| WatermossCyc | 1.0.0 | Salvinia cucullata | 301 | 760 | 1,642 | 1,396 | 2,447 |
| WheataCyc | 7.0.0 | Triticum urartu | 495 | 11,450 | 3,312 | 2,695 | 4,440 |
| WheatDCyc | 6.0.0 | Aegilops tauschii | 546 | 81,358 | 3,808 | 3,083 | 4,851 |
| WildsugarcaneCyc | 2.0.0 | Saccharum spontaneum | 571 | 19,663 | 3,855 | 3,121 | 5,017 |
| ValleyoakCyc | 3.0.0 | Quercus lobata | 531 | 9,710 | 3,449 | 2,813 | 4,600 |
| VanillaCyc | 1.0.0 | Vanilla planifolia | 310 | 1,069 | 1,740 | 1,545 | 2,504 |
| ZmarinaCyc | 5.0.0 | Zostera marina | 449 | 4,494 | 2,859 | 2,284 | 3,774 |