AraCyc 17.2.0

Taxonomic Range:
Arabidopsis thaliana col
Protein Sequence Source:

AraPort v11: Araport11_genes.201606.pep.repr.fasta

Enzyme Functional Annotation Method:

E2P2v4.0

Enzyme Evidence:
  • Substantial manual curation of enzymes
  • In addition, large-scale computational predictions of enzyme function not subject to curator review
Pathway Prediction Program
Pathway Tools 26.0
SAVI pathway validation list:

MCP 2.0
AIPP 6.0
CAPP 6.0
CVP 6.0
NPP 9.0
UPP 9.0

Pathway Evidence:
  • Substantial manual curation of pathways
  • Some computational prediction of pathways followed by curator review
  • Additional pathways imported from MetaCyc based on curator inference

Link to PGDB:

Number of Pathways:
650
Number of Reactions:
3793
Number of Compounds:
3029
Number of Enzymes:
8759
Number of Citations:
7268