AraCyc 9.0

AraCyc

Taxonomic Range:
Protein Sequence Source:

TAIR: various genome releases includingTAIR10_pep_20110103_representative_gene_model

Enzyme Functional Annotation Method:

Various methods over time including E2P2 1.0 and process described in Zhang 2010

Enzyme Evidence:
  • Substantial manual curation of enzymes
  • In addition, large-scale computational predictions of enzyme function not subject to curator review
Pathway Prediction Program
several versions of Pathway Tools
SAVI pathway validation list:
Pathway Evidence:
  • Substantial manual curation of pathways
  • Some computational prediction of pathways followed by curator review
  • Additional pathways imported from MetaCyc based on curator inference

Link to PGDB: AraCyc

Number of Pathways:
502
Number of Reactions:
3320
Number of Compounds:
3320
Number of Enzymes:
7100
Number of Citations:
3210