RedsageCyc 2.0

Protein Sequence Source:

Herbal Medicine Omics Database: danshen.pep (file no longer available for download online)

Enzyme Functional Annotation Method:
Enzyme Evidence:
  • Almost exclusively large-scale computational predictions of enzyme function not subject to curator review
  • Small number of manually curated enzymes
Pathway Prediction Program
Pathway Tools v21.5 (primarily)
Pathway Evidence:
  • Substantial manual curation of pathways
  • Some computational prediction of pathways followed by curator review
  • Additional pathways imported from MetaCyc based on curator inference

Link to PGDB: RedsageCyc

Number of Pathways:
479
Number of Reactions:
3039
Number of Compounds:
2304
Number of Enzymes:
5081
Number of Citations:
4082