ParentOverviewReleased: PMN 16 (July 2024) Taxonomic Range: Quercus lobataProtein Sequence Source: Valley Oak Genome Project: Qlobata.v3.0.PCG.prot.fasta Enzyme Functional Annotation Method: E2P2v5.0 Enzyme Evidence: Almost exclusively large-scale computational predictions of enzyme function not subject to curator review Small number of manually curated enzymes Pathway Prediction Program: Pathway Tools 28.0SAVI pathway validation lists: MCP 2.0AIPP 7.0CAPP 7.0CVP 7.0NPP 10.0UPP 10.0 Pathway Evidence: Substantial manual curation of pathways Some computational prediction of pathways followed by curator review Additional pathways imported from MetaCyc based on curator inference Link to PGDB: ValleyoakCyc Content StatisticsNumber of Pathways: 531Number of Reactions: 3449Number of Compounds: 2813Number of Enzymes: 9710Number of Citations: 4600
